Charli Deepak Arulanandam, Inamul Hasan Madar, Vinoth Kumar Ponnusamy**, Arthur James Rathinam and Hans-Uwe Dahms* |
Corresponding Author: Dr. Hans-Uwe Dahms, Vinoth Kumar Ponnusamy |
Received: December 18, 2017; Revised: April 17, 2018; Accepted: January 26, 2018 |
DOI: Dr. Hans-Uwe Dahms, Vinoth Kumar Ponnusamy, Research Center for Environmental Medicine, KMU - Kaohsiung Medical University, Taiwan |
Citation: Arulanandam C D, Madar I H, Ponnusamy V K, Rathinam A J & Dahms H-U. (2018) Human Skin Sensitizing Properties, Mutagenicity and Blood-Brain Barrier Penetration of Organotin Compounds Using in silico Approaches. Biomed Res J, 2(1): 18-27. |
Copyrights: ©2018 Arulanandam C D, Madar I H, Ponnusamy V K, Rathinam A J & Dahms H-U. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
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Tributyltins belong to the trialkyl organotin
compound group which is widely used as plastic stabilizers and biocides.
Several unwanted organism groups are controlled by these biocides. We
investigated here 32 TBT compounds for their toxic effects on humans. As for skin sensitization Toxtree predicts that none of the TBTs tested
is causing human skin irritation or skin corrosion. All TBT compounds can
penetrate the blood-brain barrier as predicted by the LAZAR web server tool. TBTBe
is a non-sensitizer according to the activation test of human cell lines. But,
it is a human skin sensitizer according to the in silico Keratino SensTM tool. TBTG and TBTPh both are
non-sensitizers to human skin based on the Pred-Skin in silico assessment. The pKCSM tool (Keratino Sens TM model from
Pred-Skin web server) predicts TBT, TBT2E, TBTA, TBTAc, TBTAz, TBTBr, TBTCA,
TBTCl, TBTCl-d27, TBTCN, TBTEO, TBTF, TBTH, TBTI, TBTIA, TBTIC, TBTIPS, TBTIt,
TBTL, TBTMc, TBTMO and TBTPr as skin sensitizers. Other TBTs are non-skin
sensitizers. TBTAz, TBTIC, TBTCA, TBTPAZ are predicted as
mutagens; other TBTs studied here as non-mutagens. Our results show that in silico approaches can provide a fast,
reliable, and economical way to explore the toxicological effects of emerging
contaminants like tributyl compounds by chemo informatic tools.
Keywords: Tributyltin,
Computational chemistry, Computational biology, Human
toxicity, Skin sensitization, Mutagenicity, Blood-brain barrier, SMILES.
Abbreviations: ADMET: Absorption, Distribution, Metabolism, Excretion, Toxicity; BBB, Blood-brain
Barrier; LAZAR: Lazy Structure-activity Relationships; LLNA: Murine Local Lymph
Node Assay; QSAR: Quantitative
Structure-activity Relationship; SMILES: Simplified Molecular Input Line Entry
System; TBT: Tributyltin.
INTRODUCTION
The principal use of organotins or Tributyltin
compounds (TBTs) is primarily as stabilizers in the manufacturing of plastics.
In addition are TBTs used as biocides, such as insecticides, fungicides, and
bactericides. This way they preserve electrical equipment, leather, textiles,
wood, and paper. Underwater structures, such as pipelines or ship hulls are
typically prevented from fouling (settlement of macroorganisms) and corrosion
by TBT oxides or methacrylate [1]. TBTs are also used as biocides in cooling
systems [2].
Generally, TBT compounds are moderately toxic
to rodents and humans. Although its extent is not known, human skin is sensitive
to TBTO. Inhalation of TBTs may cause headache, incoordination, and weakness,
and may interfere with breathing [3-4].
For the assessment of chemicals, computational
methods such as the quantitative structure-activity relationship (QSAR) models
is increasingly required or encouraged, in order to increase the reliability
and efficiency of risk assessments for environmental and human health and to
replace and minimize the reliance on animal testing [5].
Chemically induced skin sensitization that can
be induced by chemicals can substantially affect the working ability and the
quality of life. Due to high expenditures for experimental testing, there is
some necessity to develop alternative ways of toxicity testing that can replace
the costly and time-consuming ones. These include computational approaches that
use computer software to evaluate toxicological end points such as mutagenicity
[6], blood-brain barrier penetrability, and skin sensitization. In the present
study, we examined TBT compound toxicity by in
silico tools such as toxtree, lazar Toxicity Predictions; Pred-Skin[7], and
pKCSM. The objectives of this study were to screen for toxicological effects of
TBTs on human skin and other toxicological end points in a reliable and
economic way.
MATERIALS AND METHODS
Data collection and retrieval of molecular structures
Test compound names, abbreviations and PubChem
compound identifier numbers (PCIDs) are provided in Table 1. The molecular two-dimensional structures of TBT compounds
were drawn (Figure 1) using Marvin
Sketch 17.6, based on available molecular data from PubChem. This Java-based
chemical drawing tool allowed to create and edit molecules in different file
formats available from chemaxon [8,9].
SMILES based input format for compounds
Molecular structures are represented as strings
of special characters using a simplified molecular input line entry system
(SMILES) and such kernel strings are used for our computational toxicity
prediction. SMILES based similarity functions are computationally more
efficient [10]. SMILES of the test compounds were obtained from PubChem and
shown in Table 2. Skin sensitization prediction
pKCSM: The pKCSM tool is a freely accessible web server tool using graph-based
signatures to indicate ADMET (Absorption, Distribution, Metabolism, Excretion,
and Toxicity) properties of drugs or drug candidates [11]. It is used to
predict the skin sensitization of TBT compounds and is available at
http://biosig.unimelb.edu.au/pkcsm/prediction (Table 2).
Pred-Skin 2.0: Pred-Skin QSAR model screens for the sensitization
potential on human skin. This tool was developed from human (109 compounds) and
murine local lymph node assays (LLNA, 515 compounds). Experimental data by Braga and co-workers
(2017) included a multiclass skin sensitization potency model based on LLNA
data. When a user evaluates a compound in the web app, the outputs are (i)
binary prediction of human and murine skin sensitization potential; (ii) a
multiclass prediction of murine skin sensitization; and (iii) probability maps
illustrating the predicted contribution of chemical fragments. The Pred-Skin
web app version 1.0 is freely available from the web, iOS at the LabMol web
portal, in the Apple Store, and on Google Play, respectively [7]. Such a tool
is used to predict the skin sensitization of TBT compounds and this tool is
available at Lab Mol [12]. Toxtree:
Characteristics of TBTs: mutagenicity and protein binding alert
In order to predict the mutagenicity of
chemicals, we used the bacterial reverse mutation assay (Ames test) [13]. To
reduce the time and the expenditure of bacterial culture media, we used the
Toxtree in silico tool to predict the
mutagenicity of TBTs. The Toxtree toxicity prediction tool is available from
http://toxtree.sourceforge.net/. The toxicological endpoints predicated by this
program include mutagenicity, carcinogenicity, and protein binding alert, DNA
binding alert, and biodegradability of chemical substances [14]. In this study,
we assessed TBT compound-protein binding alert, mutagenicity and
biodegradability.
LAZAR: TBTs penetration of blood-brain barrier (BBB)
The lazar toxicity prediction tool is available
from https://nano-lazar.in-silico.ch/predict. LAZAR provides toxicological
predictions by the analysis of compound structures. This holds for
mutagenicity, blood-brain barrier penetration, rodent carcinogenicity, and
maximum recommended doses [14]. In this study, we used the LAZAR tool to
predict the BBB penetration. Predicted results are shown in STable1.
RESULTS AND DISCUSSION
Human skin sensitization
Toxtree predicts that all the tested TBT
compounds do not have skin irritation nor skin corrosion properties. All the
TBT compounds investigated here can penetrate BBB as predicted by the LAZAR web
server tool (Table 2). The Pred-Skin 2.0 tool
predicts all TBT compounds - except TBTBe - as skin sensitizers.
According to the human cell line activation
test by Pred-Skin TBTBe is a non-sensitizer. But, it is a sensitizer according
to in silico human skin sensitization
and Keratino SensTM.
TBTG and TBTPh both are non-sensitizers to
human skin based on the Pred-Skin in
silico assessment.
The pKCSM tool predicts TBT, TBT2E, TBTA,
TBTAc, TBTAz, TBTBr, TBTCA, TBTCl, TBTCl-d27, TBTCN, TBTEO, TBTF, TBTH, TBTI,
TBTIA, TBTIC, TBTIPS, TBTIt, TBTL, TBTMc, TBTMO and TBTPr as skin sensitizers.
Other TBTs are non-skin sensitizers (Table
3).
Mutagenicity
Toxtree predicts TBTAz, TBTIC, TBTCA, TBTPAZ as
mutagens. Other TBT compounds are predicted as nonmutagens. Toxtree tool shows
protein binding alerts for TBTPh, TBTSa, TBTBe, TBTCA, TBTL, TBTIt, and TBTPAZ.
Other TBTs do not have protein binding effects (Table 4). Earlier reports on the prediction of mutagenicity often
used toxicophores rather than whole-molecules as predictive tools [15].
LAZAR: TBTs penetration of the blood-brain barrier (BBB)
The lazar toxicity prediction tool provides
predictions about the blood-brain barrier penetration. According to this tool
are all TBT compounds screened here penetrating the human BBB. See also STable 1.
CONCLUSIONS
In silico predictive
models provide fast and economic screening tools for desirable and other
compound properties. Computational
approaches as demonstrated here can also demarcate chemicals for their
toxicological evaluation in order to reduce the amount of costly in vivo and in vitro toxicological testing and also provide early alerts for
newly developed substances.
ACKNOWLEDGMENTS
HUD and VK acknowledge
the support of the Research Center of Environmental Medicine, Kaohsiung Medical
University (KMU), and CDA
acknowledges the Kaohsiung Medical University scholarship for international
students. We thank Ms. Revathi Gurunathan, Mrs. Sravya Kosuru, and Mr.
Cheng-Han Liu for their assistance in this computational study.
COMPETING INTEREST STATEMENT
The authors declare no competing interests
associated with this manuscript.
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